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118 discussions - 262 posts

  • Hello ... With a new checkout of R-devel (last update was 2003-09-11) we are having a problem (it seems to be happening to all of us here on a few different machines) where during install/check/etc ...
    Jeff GentryJeff Gentry
    Sep 16, 2003 at 2:08 pm
    Sep 18, 2003 at 10:43 am
  • Full_Name: Gregory L. Blevins Version: 1.8 OS: Windows 2000 Submission from: (NULL) (65.29.54.28) I see this when I open 1.8 Error in grep("united.states", Sys.getlocale("LC_CTYPE"), TRUE) : 5 ...
    GblevinsGblevins
    Sep 20, 2003 at 7:58 pm
    Sep 22, 2003 at 4:59 pm
  • Have you tried to make R under MSYS/MinGW, there would seem to be some obvious benefits to this over the current collection of Cygwin tools? In the end I don't think a separate windows install of R ...
    Marsland, JohnMarsland, John
    Sep 30, 2003 at 12:33 pm
    Oct 7, 2003 at 10:00 am
  • I've been having problems building vignettes in bioconductor packages with R-devel. Turns out that Rdevel/share/texmf/hyperref.cfg wants Blue and Red predefined, when only blue and red are defined ...
    A.J. RossiniA.J. Rossini
    Sep 10, 2003 at 4:34 pm
    Sep 12, 2003 at 9:58 am
  • Full_Name: Axel Benz Version: 1.7.1 OS: Windows Submission from: (NULL) (137.251.33.43) This feature seems to be a basic bug: [1] TRUE isn't it necessary to distinguish beteen numbers and ...
    Axel BenzAxel Benz
    Sep 13, 2003 at 1:36 pm
    Sep 14, 2003 at 10:35 pm
  • Bugs compiling R-1.7.1 with Intel compilers icc and ifc, on x86-computer (Pentium IV) and linux operating system Hello, as there aren't many reports about that issue, I'll give a little report here ...
    CanisMaiorCanisMaior
    Sep 25, 2003 at 11:25 am
    Sep 26, 2003 at 8:29 pm
  • Full_Name: Kevin S. Van Horn Version: 1.7.1 OS: Linux Submission from: (NULL) (12.209.149.192) I used help.start() to get the web help displayed in my browser (Mozilla 1.21, on a RedHat Linux 9.0 ...
    KvanhornKvanhorn
    Sep 22, 2003 at 8:18 pm
    Sep 23, 2003 at 10:58 pm
  • ?dump says: Details: At present the implementation of `dump' is very incomplete and it really only works for functions and simple vectors. [...] The function `save' is designed to be used for ...
    Liaw, AndyLiaw, Andy
    Sep 30, 2003 at 2:57 pm
    Nov 9, 2003 at 2:54 pm
  • It seems that RAqua consumes too much cpu time when doing nothing. I can't see exactly why this is happening. We have few days to fix this up. Any idea (after having look at the code) would be fine ...
    Stefano IacusStefano Iacus
    Sep 16, 2003 at 10:23 am
    Sep 16, 2003 at 3:21 pm
  • Hi, in last nights alpha version, `var' is broken: R var(rnorm(100)) Error in var(rnorm(100)) : 3 arguments passed to "cov" which requires 4. which I suspect is due to recent changes to `cov'. The ...
    Torsten HothornTorsten Hothorn
    Sep 16, 2003 at 11:56 am
    Sep 16, 2003 at 3:21 pm
  • Full_Name: Doug Grove Version: 1.7.0 OS: Linux Submission from: (NULL) (209.31.211.56) Hi, Minor mistake in the documentation on the colSums page. In the ARGUMENTS section it states for 'dims' that ...
    DgroveDgrove
    Sep 14, 2003 at 6:01 am
    Sep 15, 2003 at 5:01 pm
  • These are two small items that caught my eye. I'm looking at the R 1.7.1 2003-06-16 pdf reference manual. There are several refences to terms.default (e.g., p. 711, 712) but no definitions of it. I'm ...
    RossRoss
    Sep 12, 2003 at 11:40 pm
    Sep 15, 2003 at 10:03 am
  • I could have used this also. Currently I do this: z <- ifelse(is.na(y),NA,rank(y)) names(z) <- names(y) The following also works but is less transparent: z <- y z[z==z] <- rank(y) Another extension ...
    Gabor GrothendieckGabor Grothendieck
    Sep 11, 2003 at 8:09 am
    Sep 11, 2003 at 5:16 pm
  • # Your mailer is set to "none" (default on Windows), # hence we cannot send the bug report directly from R. # Please copy the bug report (after finishing it) to # your favorite email program and send ...
    IwhiteIwhite
    Sep 7, 2003 at 5:00 pm
    Sep 7, 2003 at 6:14 pm
  • Please give us an example of what you mean (as the FAQ asks). Exactly what order are you doing things in? You can't send scripts to graphics devices, and you should not be calling par(new=TRUE) ...
    Prof Brian RipleyProf Brian Ripley
    Sep 1, 2003 at 8:42 pm
    Sep 1, 2003 at 9:15 pm
  • Problem: neither fg or bg nor color work properly in dotchart. version: R-1.7.1 for windows code which shows the errors: x <- ...
    I WilsonI Wilson
    Sep 29, 2003 at 12:24 pm
    Sep 29, 2003 at 2:36 pm
  • Hello, the last command (isGeneric) in following R-code (attached) produces different output, depending on wheter 1.8.0 alpha or 1.7.1 is used. Is that to be expected ? Both R Versions were started ...
    Thomas StablaThomas Stabla
    Sep 27, 2003 at 9:37 pm
    Sep 29, 2003 at 2:25 pm
  • I ran into a problem recently trying to update a package which uses S4 methods using a recent beta of R. I think I can reproduce it with a simple example. I have package called `testpkg' in directory ...
    Roger D. PengRoger D. Peng
    Sep 28, 2003 at 6:09 pm
    Sep 29, 2003 at 2:07 pm
  • Full_Name: Mark Wall Version: 1.6.0 OS: linux Submission from: (NULL) (63.251.119.254) I want to plot a histogram of a *subset* of some data: This means I should plot a histogram from 0 to 5 with ...
    MwallMwall
    Sep 18, 2003 at 10:35 pm
    Sep 26, 2003 at 5:31 am
  • I'm not sure if the following is a bug or a feature: xyz tuv qrs ABC 1 3 5 Error in "[.data.frame"(jjdf, , "tu") : undefined columns selected The questionable behaviour is that partial matching of ...
    Patrick BurnsPatrick Burns
    Sep 24, 2003 at 7:59 pm
    Sep 25, 2003 at 11:42 am
  • Hi, Any plans to realse in Cran binaries for R base & packages, for Windows using 64bit, now that the AMD 64 is coming out? It seems a perfect match for cost effective high performane number ...
    Alex GracianAlex Gracian
    Sep 24, 2003 at 10:18 am
    Sep 24, 2003 at 11:16 am
  • These can also be removed by changing qbeta.c:156-157 (R-1.7.1) to y = (y-a) * xinbta * (1.0-xinbta) * exp (logbeta - pp * log(xinbta) - qq * log1p(-xinbta)); I don't understand why you have ...
    Tim MassinghamTim Massingham
    Sep 22, 2003 at 3:46 pm
    Sep 22, 2003 at 5:10 pm
  • Has anyone successfully built the XML package for Darwin R 1.8.0 alpha? If so, in what configurations? stefano
    Stefano IacusStefano Iacus
    Sep 20, 2003 at 11:09 am
    Sep 20, 2003 at 10:14 pm
  • Full_Name: Mark J. Lamias Version: 1.7.0 OS: Windows 2000 Pro Submission from: (NULL) (65.222.84.72) I am running the qwilcox procedure and it is producing incorrect results. For example, ...
    Mark LamiasMark Lamias
    Sep 18, 2003 at 1:19 am
    Sep 18, 2003 at 10:48 am
  • [,1] [1,] 1 <0 x 0 matrix [,1] [1,] 0.4843697 There's an obvious work around... but I thought it was worth notifying the list. Regards, John Marsland ...
    Marsland, JohnMarsland, John
    Sep 17, 2003 at 6:51 pm
    Sep 17, 2003 at 8:00 pm
  • Full_Name: Axel Benz Version: 1.7.1 OS: Windows Submission from: (NULL) (137.251.33.43) Hello, I guess many people will answer me again that this is a S language feature, but I am only a stupid ...
    Axel BenzAxel Benz
    Sep 16, 2003 at 9:40 pm
    Sep 16, 2003 at 9:40 pm
  • For the last, I dunno, week or so I've been unable to build R... I finally took the time to investigate and the crash is in building 'methods': all.R is unchanged ...
    Byron EllisByron Ellis
    Sep 14, 2003 at 2:14 am
    Sep 14, 2003 at 10:57 am
  • a new version of RAqua is now available. The major change for developers is that libR.dylib is now inside /Applications/StartR.app/RAqua.app/Contents/Frameworks and at build time the linker sets this ...
    Stefano IacusStefano Iacus
    Sep 13, 2003 at 2:06 pm
    Sep 13, 2003 at 2:20 pm
  • Hi, I just downloaded rw1080dev.exe 09-Sep-2003 07:42 21.6M from http://www.stats.uwo.ca/faculty/murdoch/software/r-devel/ and tried using tkrplot on Windows 2000. .First.lib failed to load the ...
    James WettenhallJames Wettenhall
    Sep 12, 2003 at 9:17 am
    Sep 12, 2003 at 9:58 am
  • Full_Name: Graeme Ambler Version: 1.7.1 OS: Red Hat Linux 9 Submission from: (NULL) (137.222.80.161) There seems to be a curious accuracy-related problem in summary(). Try the following ...
    Graeme AmblerGraeme Ambler
    Sep 8, 2003 at 2:57 pm
    Sep 9, 2003 at 3:09 pm
  • pacf in devel seems by default to return a different number of lags than 1.7.1 for $pacf. I don't see any mention of this in the NEWS file, or any change in the documentation, so I suspect it is and ...
    Paul GilbertPaul Gilbert
    Sep 8, 2003 at 2:45 pm
    Sep 8, 2003 at 6:07 pm
  • The current version of the methods package now has a namespace. Packages using S4 methods and classes can have NAMESPACE files. New directives can be included in NAMESPACE files to import and export ...
    John ChambersJohn Chambers
    Sep 5, 2003 at 1:12 pm
    Sep 8, 2003 at 10:31 am
  • Full_Name: Colin A. Smith Version: 1.8.0 OS: Mac OS X 10.2.6 Submission from: (NULL) (216.102.90.18) Both Biobase and my package annaffy use S4 classes to define methods for "[". Both packages use ...
    ColinColin
    Sep 5, 2003 at 11:54 am
    Sep 6, 2003 at 10:40 am
  • we are trying to adapt the configure in order to work with latest gcc3.3 (from apple) and g77 3.4 (from http://gravity.psu.edu/~khanna/hpc.html ) At the moment there is no need to define the ...
    Stefano IacusStefano Iacus
    Sep 4, 2003 at 11:38 pm
    Sep 5, 2003 at 10:28 am
  • stack imbalance in internal readBin, 9 then 8stack imbalance in .Internal, 8 then 7 stack imbalance in {, 6 then 5 NULL Error: unprotect(): stack imbalance This was in today's r-devel build for ...
    DmurdochDmurdoch
    Sep 1, 2003 at 10:32 pm
    Sep 1, 2003 at 11:14 pm
  • Full_Name: Peng Liu Version: 1.7.1 OS: XP Home Submission from: (NULL) (128.109.14.2) [1] "1980-04-06 01:00:00" Convert incorrectly.
    Pliu3Pliu3
    Sep 17, 2003 at 5:16 pm
    Nov 2, 2003 at 12:30 pm
  • It was fixed in response to another bug report about eigen of NA values. -thomas
    Thomas LumleyThomas Lumley
    Sep 30, 2003 at 5:09 pm
    Sep 30, 2003 at 11:49 pm
  • Is this a bug? I do this: library(mva) data(USArrests) d <- dist(USArrests) dump("d", "tst") q() I restart R and do this: source("tst") And I get: Error in as.matrix(x) : Object "USArrests" not found ...
    Peter KleiwegPeter Kleiweg
    Sep 30, 2003 at 7:30 pm
    Sep 30, 2003 at 9:45 pm
  • plot.hclust: Setting up a window for a dendrogram assumes the first link is the shortest and the last is the longest. This is not always the case when the clustering was done with hclust, ...
    KleiwegKleiweg
    Sep 17, 2003 at 1:33 am
    Sep 30, 2003 at 6:03 pm
  • Yep, the problem is the "-mGLOB_options_string=......" one gets, and AC_F77_LIBRARY_LDFLAGS() cannot handle this. I tend to avoid overloading stuff from Autoconf (and am not a fan of unconditionally ...
    Kurt HornikKurt Hornik
    Sep 26, 2003 at 8:29 pm
    Sep 26, 2003 at 8:29 pm
  • Problem: ?Extract does not clearly state that the `drop' argument can only be used in subscripting, but not in subassigning. Example: x <- t(1:10) x [,1] [,2] [,3] [,4] [,5] [,6] [,7] [,8] [,9] [,10] ...
    David MeyerDavid Meyer
    Sep 25, 2003 at 1:09 pm
    Sep 25, 2003 at 2:48 pm
  • When I configure and make R-devel in a directory other than the one where I keep the source, there are a few top level files which are not copied to the build directory. The ones I use are VERSION ...
    Paul GilbertPaul Gilbert
    Sep 24, 2003 at 11:55 am
    Sep 25, 2003 at 10:20 am
  • In R-1.7.1, I used to be able to append a character vector to a 'tklistbox' with e.g. listio <- tklistbox( tktoplevel(), font='Courier', height , width , setgrid=TRUE) tkinsert( listio, 'end', ...
    Mark BravingtonMark Bravington
    Sep 25, 2003 at 7:16 am
    Sep 25, 2003 at 9:22 am
  • Full_Name: Diana Maria Montoya Quintero Version: 11.5 OS: Windows Submission from: (NULL) (200.30.99.181) I have a chart with approximately 17840 data. When I run these data using an algorhytm called ...
    DquinteroDquintero
    Sep 24, 2003 at 11:41 pm
    Sep 24, 2003 at 11:56 pm
  • Full_Name: Michael Hecht Version: 1.7.1 OS: WinNT Submission from: (NULL) (193.158.76.205) I've got a problem with the RODBC library while trying to access to an MS-Excel file. The Excel file was ...
    Michael HechtMichael Hecht
    Sep 23, 2003 at 9:39 am
    Sep 23, 2003 at 10:15 am
  • Full_Name: Xiaobao Wang Version: R 1.7.1 OS: Windows XP Submission from: (NULL) (24.45.25.102) accidentally done the following: rpt.dir <- paste("c:/report/testR","bestsub",spe="/") ...
    Xiaobao_wangXiaobao_wang
    Sep 22, 2003 at 3:26 am
    Sep 22, 2003 at 9:49 pm
  • Hi, with R v1.7.1 (=I don't recall I saw it before) I noticed that R CMD INSTALL sometimes generates nonsense information, e.g. "Bundle: NA", even if there was a correct DESCRIPTION file too. I turns ...
    Henrik BengtssonHenrik Bengtsson
    Sep 19, 2003 at 3:27 pm
    Sep 20, 2003 at 1:13 pm
  • I would propose to add an option ``family'' to RweaveLatex() resp. RweaveLatexSetup() in order to be able to set the font family for postscript and pdf graphics: <<fig=TRUE, family=Palatino = ... @ ...
    Wolfram FischerWolfram Fischer
    Sep 18, 2003 at 11:20 am
    Sep 19, 2003 at 8:49 am
  • Hi, Just to report. I yesterday's r-devel I get: Error in var(x, na.rm = na.rm) : 3 arguments passed to "cov" which requires 4. Regards, L.
    Laurent GautierLaurent Gautier
    Sep 18, 2003 at 1:19 pm
    Sep 18, 2003 at 1:34 pm
  • Hello, I have compiled R-1.7.1 on Beos R5 (x86) and got it running. The modules x11 and internet dont work (so the only working display is postscript()). The libraries all compile, but there is a ...
    Ole SielingOle Sieling
    Sep 14, 2003 at 3:50 pm
    Sep 17, 2003 at 8:00 pm
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Peter Dalgaard BSA: 20 posts Ripley: 17 posts John Chambers: 14 posts Duncan Murdoch: 12 posts Stefano Iacus: 12 posts Martin Maechler: 11 posts Uwe Ligges: 11 posts Kurt Hornik: 8 posts Friedrich Leisch: 7 posts Paul Gilbert: 6 posts Peter Kleiweg: 5 posts Saikat DebRoy: 5 posts Simon Urbanek: 5 posts A.J. Rossini: 4 posts Deepayan Sarkar: 4 posts Jeff Gentry: 4 posts Ross Ihaka: 4 posts Torsten Hothorn: 4 posts Dirk Eddelbuettel: 3 posts Mark Lamias: 3 posts
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